SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    247, 1134, 851, 1126, 2107, 1284, 2110, 
    4812, 2113, 2249, 2247, 3069, 3084, 
    3078, 3066, 3081, 3073, 7741, 9653, 
    10347, 9868, 9646, 9648, 10276, 9602, 
    9881, 9877, 9884, 9604, 9874, 10059, 
    10274, 10262
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00129

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "28.06"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 44,
        "rows_produced_per_join": 8,
        "filtered": "19.99",
        "index_condition": "(`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`product_id` in (247,1134,851,1126,2107,1284,2110,4812,2113,2249,2247,3069,3084,3078,3066,3081,3073,7741,9653,10347,9868,9646,9648,10276,9602,9881,9877,9884,9604,9874,10059,10274,10262))",
        "cost_info": {
          "read_cost": "27.18",
          "eval_cost": "0.88",
          "prefix_cost": "28.06",
          "data_read_per_join": "211"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`lower_limit` = 1) and (`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}