SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    8501, 4974, 5277, 2459, 5640, 5284, 5376, 
    5287, 5281, 5397, 4995, 5270, 2901, 
    5278, 5187, 5549, 5235, 1528, 2776, 
    2432
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00088

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "14.01"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 20,
        "rows_produced_per_join": 3,
        "filtered": "19.99",
        "index_condition": "(`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`product_id` in (8501,4974,5277,2459,5640,5284,5376,5287,5281,5397,4995,5270,2901,5278,5187,5549,5235,1528,2776,2432))",
        "cost_info": {
          "read_cost": "13.61",
          "eval_cost": "0.40",
          "prefix_cost": "14.01",
          "data_read_per_join": "95"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`lower_limit` = 1) and (`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
1528 1630000.00000000
2432 1005000.00000000
2459 671000.00000000
2776 314000.00000000
2901 672000.00000000
4974 269250.00000000
4995 156750.00000000
5187 35000.00000000
5235 35000.00000000
5270 8000.00000000
5277 8000.00000000
5278 8000.00000000
5281 8000.00000000
5284 8000.00000000
5287 8000.00000000
5376 825000.00000000
5397 1050000.00000000
5549 422500.00000000
5640 20000.00000000
8501 550000.00000000