SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    4827, 5565, 5948, 2249, 4345, 3011, 3332, 
    6380, 5275, 5922, 8240, 4635, 5053, 
    10053, 5264, 4483, 6458, 10136, 10137, 
    5825, 2202, 4327, 5924, 2149
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00115

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "16.81"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 24,
        "rows_produced_per_join": 4,
        "filtered": "19.99",
        "index_condition": "(`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`product_id` in (4827,5565,5948,2249,4345,3011,3332,6380,5275,5922,8240,4635,5053,10053,5264,4483,6458,10136,10137,5825,2202,4327,5924,2149))",
        "cost_info": {
          "read_cost": "16.33",
          "eval_cost": "0.48",
          "prefix_cost": "16.81",
          "data_read_per_join": "115"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`lower_limit` = 1) and (`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
2149 39000.00000000
2202 15000.00000000
2249 224000.00000000
3011 88500.00000000
3332 250000.00000000
4327 15000.00000000
4345 5000.00000000
4483 800000.00000000
4635 215000.00000000
4827 30000.00000000
5053 100000.00000000
5264 8000.00000000
5275 8000.00000000
5565 3195000.00000000
5825 226000.00000000
5922 850500.00000000
5924 69000.00000000
5948 69000.00000000
6380 620000.00000000
6458 435000.00000000
8240 24000.00000000
10053 9000.00000000
10136 2988000.00000000
10137 3979000.00000000