SELECT 
  cscart_product_prices.product_id, 
  MIN(
    IF(
      cscart_product_prices.percentage_discount = 0, 
      cscart_product_prices.price, 
      cscart_product_prices.price - (
        cscart_product_prices.price * cscart_product_prices.percentage_discount
      )/ 100
    )
  ) AS price 
FROM 
  cscart_product_prices 
WHERE 
  cscart_product_prices.product_id IN (
    7430, 7724, 7897, 7952, 7959, 7972, 7974, 
    8009, 8010, 9539, 9545, 6518, 6604, 
    6802, 7407, 7948, 7949, 7953, 7962, 
    7964, 7968, 8005, 8013, 9678
  ) 
  AND cscart_product_prices.lower_limit = 1 
  AND cscart_product_prices.usergroup_id IN (0, 1) 
GROUP BY 
  cscart_product_prices.product_id

Query time 0.00144

JSON explain

{
  "query_block": {
    "select_id": 1,
    "cost_info": {
      "query_cost": "16.81"
    },
    "grouping_operation": {
      "using_filesort": false,
      "table": {
        "table_name": "cscart_product_prices",
        "access_type": "range",
        "possible_keys": [
          "usergroup",
          "product_id",
          "lower_limit",
          "usergroup_id"
        ],
        "key": "product_id",
        "used_key_parts": [
          "product_id"
        ],
        "key_length": "3",
        "rows_examined_per_scan": 24,
        "rows_produced_per_join": 4,
        "filtered": "19.99",
        "index_condition": "(`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`product_id` in (7430,7724,7897,7952,7959,7972,7974,8009,8010,9539,9545,6518,6604,6802,7407,7948,7949,7953,7962,7964,7968,8005,8013,9678))",
        "cost_info": {
          "read_cost": "16.33",
          "eval_cost": "0.48",
          "prefix_cost": "16.81",
          "data_read_per_join": "115"
        },
        "used_columns": [
          "product_id",
          "price",
          "percentage_discount",
          "lower_limit",
          "usergroup_id"
        ],
        "attached_condition": "((`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`lower_limit` = 1) and (`softwarepirmam_hewadelivard_cscart_4`.`cscart_product_prices`.`usergroup_id` in (0,1)))"
      }
    }
  }
}

Result

product_id price
6518 132000.00000000
6604 56000.00000000
6802 49000.00000000
7407 2250.00000000
7430 9250.00000000
7724 175000.00000000
7897 175750.00000000
7948 25000.00000000
7949 25000.00000000
7952 18000.00000000
7953 23000.00000000
7959 23000.00000000
7962 23000.00000000
7964 375000.00000000
7968 325500.00000000
7972 449500.00000000
7974 237000.00000000
8005 255000.00000000
8009 219250.00000000
8010 224000.00000000
8013 239000.00000000
9539 8750.00000000
9545 11000.00000000
9678 8750.00000000